Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM1153Predicted alpha/beta hydrolase superfamily protein; Alternative locus ID: PMED4_13131. (340 aa)    
Predicted Functional Partners:
ilvH-2
Acetolactate synthase small subunit; Alternative locus ID: PMED4_13141.
       0.818
todF
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; Alternative locus ID: PMED4_12321.
  
     0.665
ycf39-2
Putative chaperon-like protein for quinone binding in photosystem II; Alternative locus ID: PMED4_13111.
  
    0.522
PMM0280
Retinal pigment epithelial membrane protein; Alternative locus ID: PMED4_02851.
  
     0.448
PMM1506
ATP-dependent protease La (LON) domain; Alternative locus ID: PMED4_17161.
  
     0.446
PMM0669
Conserved hypothetical protein; Alternative locus ID: PMED4_07251.
  
     0.420
PMM1966
Conserved hypothetical protein; Alternative locus ID: PMED4_13101.
       0.407
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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