Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM1178Glycosyl transferases group 1; Alternative locus ID: PMED4_13431. (364 aa)    
Predicted Functional Partners:
PMM1177
Conserved hypothetical protein; Alternative locus ID: PMED4_13421.
      0.937
PMM1179
Putative SMR family transporter, possible pecM homologue; Alternative locus ID: PMED4_13441.
  
    0.746
PMM0397
Possible Glycosyl transferase, group 1; Alternative locus ID: PMED4_04381.
  
     0.625
sppA
Signal peptide peptidase SppA (protease IV); Alternative locus ID: PMED4_13451.
       0.598
tyrA
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
       0.593
manC
GDP-mannose pyrophosphorylase; Alternative locus ID: PMED4_13611; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.578
glgA
Putative ADPglucose--glucosyltransferase (GlgA); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
    
 0.565
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.459
ugd
UDP-glucose 6-dehydrogenase; Alternative locus ID: PMED4_14271; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.419
PMM1001
Conserved hypothetical protein; Alternative locus ID: PMED4_11261.
  
     0.410
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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