Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
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[Homology]
Score
sppASignal peptide peptidase SppA (protease IV); Alternative locus ID: PMED4_13451. (269 aa)    
Predicted Functional Partners:
tyrA
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
       0.818
PMM1182
Conserved hypothetical protein; Alternative locus ID: PMED4_13471.
       0.657
PMM1179
Putative SMR family transporter, possible pecM homologue; Alternative locus ID: PMED4_13441.
       0.646
PMM1178
Glycosyl transferases group 1; Alternative locus ID: PMED4_13431.
       0.598
rpl34,
50S ribosomal protein L34; Alternative locus ID: PMED4_13481; Belongs to the bacterial ribosomal protein bL34 family.
       0.597
PMM1177
Conserved hypothetical protein; Alternative locus ID: PMED4_13421.
       0.594
rnpA
Bacterial ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.527
PMM1185
Conserved hypothetical protein; Alternative locus ID: PMED4_13501.
       0.517
yidC
Putative inner membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (By similarity); Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.
  
  
 0.481
lepB
Signal peptidase I; Alternative locus ID: PMED4_05621; Belongs to the peptidase S26 family.
      
 0.429
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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