STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1185Conserved hypothetical protein; Alternative locus ID: PMED4_13501. (137 aa)    
Predicted Functional Partners:
yidC
Putative inner membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (By similarity); Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.
 
    0.863
rnpA
Bacterial ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
    0.830
rpl34,
50S ribosomal protein L34; Alternative locus ID: PMED4_13481; Belongs to the bacterial ribosomal protein bL34 family.
  
    0.817
psbP
Photosystem II oxygen evolving complex protein PsbP; Alternative locus ID: PMED4_12441.
  
    0.779
rub
Probable rubredoxin; Alternative locus ID: PMED4_03001.
  
  
 0.778
PMM0529
Conserved hypothetical protein; Alternative locus ID: PMED4_05781.
  
    0.775
PMM0944
Conserved hypothetical protein; Alternative locus ID: PMED4_10551.
  
     0.774
PMM0680
Conserved hypothetical protein; Alternative locus ID: PMED4_07361.
  
    0.772
PMM0463
Conserved hypothetical protein; Alternative locus ID: PMED4_05111.
  
    0.771
PMM0480
Conserved hypothetical protein; Alternative locus ID: PMED4_05281.
  
     0.771
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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