Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
rfbGCDP-glucose 4,6-dehydratase; Alternative locus ID: PMED4_13681. (360 aa)    
Predicted Functional Partners:
ddhA,
Glucose-1-phosphate cytidylyltransferase; Alternative locus ID: PMED4_13691.
 0.999
PMM1205
NDP-hexose 3,4-dehydratase; Alternative locus ID: PMED4_13701; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.976
PMM1202
Possible nucleoside-diphosphate-sugar epimerase; Alternative locus ID: PMED4_13671.
 
    0.852
PMM1201
Putative CDP-tyvelose-2-epimerase (RfbE); Alternative locus ID: PMED4_13661.
 
   
0.741
PMM1200
Glycosyl transferase, family 2; Alternative locus ID: PMED4_13651.
  
    0.495
rps19,
30S Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.426
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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