STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1216Putative sugar-phosphate nucleotidyl transferase; Alternative locus ID: PMED4_13811. (239 aa)    
Predicted Functional Partners:
manC
GDP-mannose pyrophosphorylase; Alternative locus ID: PMED4_13611; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.955
cugP
Putative sugar-phosphate nucleotidyl transferase; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate.
  
 
 
0.924
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.908
PMM1217
Putative phosphoheptose isomerase; Alternative locus ID: PMED4_13821.
 
  
 0.865
PMM1214
Possible phosphatase; Alternative locus ID: PMED4_13791; Belongs to the gmhB family.
  
 
 0.805
PMM1257
Possible dTDP-glucose 4,6-dehydratase; Alternative locus ID: PMED4_14231.
 
  
 0.802
rfaE
Putative ADP-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.798
PMM1215
Conserved hypothetical protein; Alternative locus ID: PMED4_13801.
  
    0.776
PMM1219
Putative nucleoside-diphosphate sugar epimerase; Alternative locus ID: PMED4_13841.
 
   0.765
sps
Sucrose phosphate synthase; Alternative locus ID: PMED4_19231.
  
 
 0.638
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.