STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1252Possible acetyltransferase; Alternative locus ID: PMED4_14181. (150 aa)    
Predicted Functional Partners:
PMM1225
Conserved hypothetical protein; Alternative locus ID: PMED4_13901.
  
  
 0.641
manC
GDP-mannose pyrophosphorylase; Alternative locus ID: PMED4_13611; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.595
PMM1253
Possible methyltransferase; Alternative locus ID: PMED4_14191.
  
    0.543
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
 
 0.462
degT
Putative pleiotropic regulatory protein; Members of the DegT/DnrJ/EryC1/StrS family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions; Alternative locus ID: PMED4_02891; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.413
PMM1205
NDP-hexose 3,4-dehydratase; Alternative locus ID: PMED4_13701; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.413
PMM1258
Pyridoxal-phosphate-dependent aminotransferase; Alternative locus ID: PMED4_14241; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.413
PMM1259
Pyridoxal-phosphate-dependent aminotransferase; Alternative locus ID: PMED4_14251; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.413
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.