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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1283Conserved hypothetical protein; Alternative locus ID: PMED4_14491; Belongs to the BI1 family. (245 aa)    
Predicted Functional Partners:
PMM0833
Conserved hypothetical protein; Alternative locus ID: PMED4_09271.
  
   
 0.765
PMM0845
Conserved hypothetical protein; Alternative locus ID: PMED4_09401.
  
     0.755
PMM0139
Conserved hypothetical protein; Alternative locus ID: PMED4_01451.
  
     0.747
PMM0739
Conserved hypothetical protein; Alternative locus ID: PMED4_08231.
  
    0.738
PMM0063
Conserved hypothetical protein; Alternative locus ID: PMED4_00651.
  
    0.718
PMM1595
Conserved hypothetical protein; Alternative locus ID: PMED4_18051.
  
     0.704
PMM0146
Conserved hypothetical protein; Alternative locus ID: PMED4_01521.
  
    0.702
PMM1287
Conserved hypothetical protein; Alternative locus ID: PMED4_14531.
 
    0.700
PMM1326
Conserved hypothetical protein; Alternative locus ID: PMED4_14941.
  
    0.696
PMM0604
Conserved hypothetical protein; Alternative locus ID: PMED4_06531.
  
    0.678
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.