Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
codAPossible cytosine deaminase; Alternative locus ID: PMED4_14711. (411 aa)    
Predicted Functional Partners:
PMM0531
Creatininase; Alternative locus ID: PMED4_05801.
 
 
 0.972
PMM1303
Conserved hypothetical protein; Alternative locus ID: PMED4_14701.
 
    0.933
PMM0776
Putative uracil phosphoribosyltransferase; Alternative locus ID: PMED4_08611.
  
 
 0.929
pyrR
Phosphoribosyl transferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
     
 0.902
panC,
Putative bifunctional enzyme; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the C-terminal section; belongs to the cytidylate kinase family. Type 1 subfamily.
  
  
 0.664
PMM0585
Conserved hypothetical protein; Alternative locus ID: PMED4_06341.
  
    0.637
miaB
Conserved hypothetical protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.537
ddlA
D-alanine--D-alanine ligase; Cell wall formation.
  
    0.530
PMM1307
Conserved hypothetical protein; Alternative locus ID: PMED4_14741.
  
    0.521
PMM1308
Conserved hypothetical protein; Alternative locus ID: PMED4_14751.
  
    0.517
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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