Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
PMM1350Pentapeptide repeats; Alternative locus ID: PMED4_15181. (192 aa)    
Predicted Functional Partners:
PMM1369
GAF domain; Alternative locus ID: PMED4_15401.
      
 0.851
psbO
Photosystem II manganese-stabilizing protein; Alternative locus ID: PMED4_02331.
  
    0.748
PMM0680
Conserved hypothetical protein; Alternative locus ID: PMED4_07361.
  
     0.717
PMM0620
Conserved hypothetical protein; Alternative locus ID: PMED4_06691.
  
     0.716
PMM0529
Conserved hypothetical protein; Alternative locus ID: PMED4_05781.
  
    0.702
psbP
Photosystem II oxygen evolving complex protein PsbP; Alternative locus ID: PMED4_12441.
  
     0.689
pds,crtD
Phytoene desaturase; Alternative locus ID: PMED4_01501.
  
     0.687
psb28
Possible Photosystem II reaction center Psb28 protein; Alternative locus ID: PMED4_10371; Belongs to the Psb28 family.
  
     0.674
rnz
Conserved hypothetical protein; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.671
PMM0148
Conserved hypothetical protein; Alternative locus ID: PMED4_01541.
  
    0.665
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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