Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
serAPutative D-3-phosphoglycerate dehydrogenase (PGDH); Alternative locus ID: PMED4_15221; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (528 aa)    
Predicted Functional Partners:
uppP
Bacitracin resistance protein BacA; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
   
  
 0.919
pgmI
Phosphoglycerate mutase, co-factor-independent (iPGM); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
 
 0.902
PMM0959
Conserved hypothetical protein; Alternative locus ID: PMED4_10711.
     
 0.900
prmA
Putative methyltransferase for Ribosomal protein L11; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
     
 0.850
PMM0989
ATP/GTP-binding site motif A (P-loop); Alternative locus ID: PMED4_11091.
   
  0.713
PMM1355
Conserved hypothetical protein; Alternative locus ID: PMED4_15231.
       0.635
PMM1356
Conserved hypothetical protein; Alternative locus ID: PMED4_15241.
       0.634
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Alternative locus ID: PMED4_17221.
  
 
 0.612
DHSS
Soluble hydrogenase small subunit; BELONGS TO CLASS-V OF PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASES; Alternative locus ID: PMED4_00341.
  
 
 0.585
petF-2
Ferredoxin; Alternative locus ID: PMED4_15201.
  
    0.572
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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