STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1355Conserved hypothetical protein; Alternative locus ID: PMED4_15231. (188 aa)    
Predicted Functional Partners:
PMM1356
Conserved hypothetical protein; Alternative locus ID: PMED4_15241.
       0.828
serA
Putative D-3-phosphoglycerate dehydrogenase (PGDH); Alternative locus ID: PMED4_15221; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.657
prmA
Putative methyltransferase for Ribosomal protein L11; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.626
PMM1358
Conserved hypothetical protein; Alternative locus ID: PMED4_15261.
  
    0.587
PMM1357
Steroid 5-alpha reductase, C-terminal domain; Alternative locus ID: PMED4_15251.
       0.584
petF-2
Ferredoxin; Alternative locus ID: PMED4_15201.
  
    0.490
PMM1975
Conserved hypothetical protein; Alternative locus ID: PMED4_15271.
       0.488
PMM1351
Conserved hypothetical protein; Alternative locus ID: PMED4_15191.
       0.401
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.