Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM1356Conserved hypothetical protein; Alternative locus ID: PMED4_15241. (263 aa)    
Predicted Functional Partners:
psbB
Photosystem II PsbB protein (CP47); One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.
    
   0.889
PMM0466
Possible secreted protein MPB70 precursor; Alternative locus ID: PMED4_05141.
  
 
   0.827
PMM1355
Conserved hypothetical protein; Alternative locus ID: PMED4_15231.
       0.818
rpl19
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
    
  0.761
rpl32,
50S ribosomal protein L32; Alternative locus ID: PMED4_09491; Belongs to the bacterial ribosomal protein bL32 family.
    
  0.761
rpl33,
50S Ribosomal protein L33; Alternative locus ID: PMED4_09801; Belongs to the bacterial ribosomal protein bL33 family.
    
  0.761
rpl21,
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
    
  0.761
rpl27,
50S ribosomal protein L27; Alternative locus ID: PMED4_15131; Belongs to the bacterial ribosomal protein bL27 family.
    
  0.761
rpl17,
50S ribosomal protein L17; Alternative locus ID: PMED4_17441.
    
  0.761
rpl20,
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
  0.761
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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