STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1358Conserved hypothetical protein; Alternative locus ID: PMED4_15261. (183 aa)    
Predicted Functional Partners:
PMM0052
Aldo/keto reductase family; Alternative locus ID: PMED4_00521.
   
 
 0.902
pdxJ
Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
   
 
  0.900
PMM1357
Steroid 5-alpha reductase, C-terminal domain; Alternative locus ID: PMED4_15251.
 
    0.865
PMM1975
Conserved hypothetical protein; Alternative locus ID: PMED4_15271.
       0.668
PMM1356
Conserved hypothetical protein; Alternative locus ID: PMED4_15241.
  
    0.594
PMM1355
Conserved hypothetical protein; Alternative locus ID: PMED4_15231.
  
    0.587
psbP
Photosystem II oxygen evolving complex protein PsbP; Alternative locus ID: PMED4_12441.
  
    0.542
PMM0500
Conserved hypothetical protein; Alternative locus ID: PMED4_05491.
  
     0.536
PMM1015
Conserved hypothetical protein; Alternative locus ID: PMED4_11461.
  
    0.526
PMM1371
Conserved hypothetical protein; Alternative locus ID: PMED4_15441.
  
    0.522
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.