STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1360Similar to DNA photolyase; Alternative locus ID: PMED4_15291. (379 aa)    
Predicted Functional Partners:
PMM0425
Conserved hypothetical protein; Alternative locus ID: PMED4_04701.
 
  
 0.917
PMM1361
Short-chain dehydrogenase/reductase (SDR) superfamily; Alternative locus ID: PMED4_15301.
 
  
 0.636
PMM1359
Conserved hypothetical protein; Alternative locus ID: PMED4_15281.
  
    0.607
chlG
Chlorophyll synthase 33 kD subunit; Alternative locus ID: PMED4_04751.
 
   
 0.547
PMM1006
Glutathione peroxidase; Alternative locus ID: PMED4_11341; Belongs to the glutathione peroxidase family.
  
  
 0.547
tpx
Thioredoxin peroxidase; Alternative locus ID: PMED4_09521.
     
 0.501
rub
Probable rubredoxin; Alternative locus ID: PMED4_03001.
   
  
 0.499
chlN
Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
  
     0.403
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.