Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM1369GAF domain; Alternative locus ID: PMED4_15401. (250 aa)    
Predicted Functional Partners:
nblS
Two-component sensor histidine kinase; Alternative locus ID: PMED4_15091.
    
 0.911
sasA
Two-component sensor histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs.
    
 0.904
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
      
 0.851
PMM0649
Pentapeptide repeats; Alternative locus ID: PMED4_06991.
      
 0.851
PMM1350
Pentapeptide repeats; Alternative locus ID: PMED4_15181.
      
 0.851
phoR
Two-component sensor histidine kinase, phosphate sensing; Alternative locus ID: PMED4_07801.
 
    
 0.718
PMM1367
Conserved hypothetical protein; Alternative locus ID: PMED4_15381.
       0.632
PMM1368
Conserved hypothetical protein; Alternative locus ID: PMED4_15391.
       0.570
PMM1370
Conserved hypothetical protein; Alternative locus ID: PMED4_15411.
       0.548
PMM1977
Conserved hypothetical protein; Alternative locus ID: PMED4_15371.
       0.422
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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