STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hli12Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_15731. (35 aa)    
Predicted Functional Partners:
hli11
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_15741.
  
  
 0.964
hli10
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_15861.
   
  
 0.502
PMM0997
Possible Protein of unknown function DUF67; Alternative locus ID: PMED4_11211.
   
  
 0.500
PMM1995
Conserved hypothetical protein; Alternative locus ID: PMED4_15721.
       0.465
PMM1996
Hypothetical protein; Alternative locus ID: PMED4_15751.
       0.457
PMM1997
Conserved hypothetical protein; Alternative locus ID: PMED4_15761.
       0.457
psbX
Photosystem II PsbX protein; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.
      
 0.451
PMM0686
Conserved hypothetical protein; Alternative locus ID: PMED4_07441.
      
 0.437
PMM0684
Possible Zinc finger, C2H2 type; Alternative locus ID: PMED4_07401.
   
  
 0.404
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.