STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1389Possible Trypsin; Alternative locus ID: PMED4_15841. (210 aa)    
Predicted Functional Partners:
csoS2
Carboxysome shell protein CsoS2; Alternative locus ID: PMED4_06011.
  
     0.713
PMM1047
Conserved hypothetical protein; Alternative locus ID: PMED4_11931.
  
    0.709
PMM0600
Conserved hypothetical protein; Alternative locus ID: PMED4_06491.
  
     0.701
PMM1388
Conserved hypothetical protein; Alternative locus ID: PMED4_15831.
 
    0.644
csoS3
Carboxysome shell protein CsoS3; Alternative locus ID: PMED4_06021.
  
     0.641
PMM0554
Putative carboxysome peptide A; Alternative locus ID: PMED4_06031.
  
    0.622
PMM0555
Putative carboxysome peptide B; Alternative locus ID: PMED4_06041.
  
     0.608
PMM0589
Conserved hypothetical; Alternative locus ID: PMED4_06381.
  
     0.563
PMM0795
Conserved hypothetical protein; Alternative locus ID: PMED4_08811.
  
     0.548
PMM1677
Conserved hypothetical protein; Alternative locus ID: PMED4_18881; Belongs to the SprT family.
  
    0.495
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.