STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1444Conserved hypothetical protein; Alternative locus ID: PMED4_16531. (413 aa)    
Predicted Functional Partners:
PMM1445
Putative nicotinate-nucleotide adenylyltransferase; Alternative locus ID: PMED4_16541; Belongs to the NadD family.
  
    0.836
PMM1443
Domain of unknown function DUF21; Alternative locus ID: PMED4_16521.
  
    0.829
nadE
Carbon-nitrogen hydrolase:NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.829
dnaG
CHC2 zinc finger:Toprim domain; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
   
    0.774
PMM1440
Conserved hypothetical protein; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
 
   
 0.728
PMM0824
Conserved hypothetical protein; Alternative locus ID: PMED4_09181.
  
     0.686
PMM0836
Conserved hypothetical protein; Alternative locus ID: PMED4_09301.
  
     0.684
pepP
Putative aminopeptidase P; Alternative locus ID: PMED4_16511; Belongs to the peptidase M24B family.
       0.662
PMM0239
Conserved hypothetical protein; Alternative locus ID: PMED4_02441.
  
    0.659
PMM1326
Conserved hypothetical protein; Alternative locus ID: PMED4_14941.
  
    0.631
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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