STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1561Conserved hypothetical protein; Alternative locus ID: PMED4_17711. (258 aa)    
Predicted Functional Partners:
PMM1560
Conserved hypothetical protein; Alternative locus ID: PMED4_17701.
 
    0.830
ndhN
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
 
    0.759
PMM1161
Conserved hypothetical protein; Alternative locus ID: PMED4_13211.
  
    0.656
recA
RecA bacterial DNA recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.633
PMM1287
Conserved hypothetical protein; Alternative locus ID: PMED4_14531.
  
     0.599
PMM0059
Conserved hypothetical protein; Alternative locus ID: PMED4_00611.
  
     0.592
PMM1106
Conserved hypothetical protein; Alternative locus ID: PMED4_12521.
  
    0.584
PMM0654
Conserved hypothetical protein; Alternative locus ID: PMED4_07051.
  
    0.570
PMM0904
Conserved hypothetical protein; Alternative locus ID: PMED4_10151.
  
    0.544
PMM0772
Conserved hypothetical protein; Alternative locus ID: PMED4_08571.
  
    0.541
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.