Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMM1586Conserved hypothetical protein; Alternative locus ID: PMED4_17961. (435 aa)    
Predicted Functional Partners:
PMM0059
Conserved hypothetical protein; Alternative locus ID: PMED4_00611.
 
     0.775
PMM1585
Conserved hypothetical protein; Alternative locus ID: PMED4_17951.
       0.725
PMM0582
Conserved hypothetical protein; Alternative locus ID: PMED4_06311.
  
     0.713
PMM0247
Conserved hypothetical protein; Alternative locus ID: PMED4_02521.
  
     0.705
PMM1583
Conserved hypothetical protein; Alternative locus ID: PMED4_17931.
  
     0.687
PMM1386
Possible permease; Alternative locus ID: PMED4_15811.
 
     0.679
PMM1325
Conserved hypothetical protein; Alternative locus ID: PMED4_14931.
  
     0.668
PMM0953
Conserved hypothetical protein; Alternative locus ID: PMED4_10631.
  
     0.661
PMM0752
Glycosyl transferase, family 2; Alternative locus ID: PMED4_08371.
  
     0.660
PMM0248
Conserved hypothetical protein; Alternative locus ID: PMED4_02531.
  
     0.634
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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