STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1620Conserved hypothetical protein; Alternative locus ID: PMED4_18301. (179 aa)    
Predicted Functional Partners:
mreC
Putative rod shape-determining protein; Alternative locus ID: PMED4_18311.
  
 
 0.982
mreB
Rod shape determining protein; Alternative locus ID: PMED4_18321.
  
  
 0.882
minC
Possible septum site-determining protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.828
ssb
Single-stranded DNA-binding protein; Alternative locus ID: PMED4_18331.
       0.646
minD
Putative septum site-determining protein MinD; Alternative locus ID: PMED4_03281.
  
  
 0.614
PMM1619
Two-component response regulator; Alternative locus ID: PMED4_18291.
       0.580
lysS
Lysyl-tRNA synthetase; Alternative locus ID: PMED4_18281; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.508
nadE
Carbon-nitrogen hydrolase:NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.457
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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