STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1803Membrane protein; Alternative locus ID: PMED4_00781. (56 aa)    
Predicted Functional Partners:
PMM0075
Conserved hypothetical protein; Alternative locus ID: PMED4_00771.
       0.796
pgm
Phosphoglucomutase; Alternative locus ID: PMED4_00791.
       0.743
yrvN
Putative ATPase, AAA family; Alternative locus ID: PMED4_00801.
       0.669
PMM0074
Conserved hypothetical; Alternative locus ID: PMED4_00761.
       0.544
PMM0073
ABC transporter, membrane component; Alternative locus ID: PMED4_00751.
       0.461
PMM0070
Putative cysteine desulfurase or selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.443
PMM0071
ABC transporter, membrane component; Alternative locus ID: PMED4_00731.
       0.443
PMM0072
ABC transporter, ATP binding component; Alternative locus ID: PMED4_00741.
       0.443
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.