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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ57586.1SAM-dependent methyltransferase; Alternative locus ID: NATL2_07001. (227 aa)    
Predicted Functional Partners:
prfC
Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
  
    0.732
AAZ57588.1
Conserved hypothetical protein; Alternative locus ID: NATL2_07021.
       0.606
AAZ57585.1
B-12 Dependent ribonucleotide Reductase; Alternative locus ID: NATL2_06991.
       0.568
AAZ59142.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.520
AAZ59369.1
Carboxysome shell protein CsoS2; Alternative locus ID: NATL2_05881.
  
     0.506
AAZ57983.1
Conserved hypothetical protein; Alternative locus ID: NATL2_11661.
  
     0.471
AAZ59370.1
Carboxysome shell polypeptide, CsoS3; Alternative locus ID: NATL2_05891.
  
     0.469
AAZ59374.1
Conserved hypothetical protein; Alternative locus ID: NATL2_05931.
  
    0.435
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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