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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ57690.1Conserved hypothetical protein; Alternative locus ID: NATL2_08111. (178 aa)    
Predicted Functional Partners:
AAZ57695.1
CheY-like domain containing protein; Alternative locus ID: NATL2_08161.
 
     0.852
AAZ57693.1
Conserved hypothetical protein; Alternative locus ID: NATL2_08141.
 
     0.787
AAZ58646.1
Uncharacterized membrane protein; Alternative locus ID: NATL2_19771.
  
     0.767
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.766
AAZ59216.1
Conserved hypothetical protein; Alternative locus ID: NATL2_04291.
  
     0.766
AAZ57806.1
Conserved hypothetical protein; Alternative locus ID: NATL2_09331.
  
     0.760
AAZ59262.1
Transcriptional regulator AbrB; Alternative locus ID: NATL2_04791.
  
     0.760
AAZ58268.1
Cyanobacterial porin; Alternative locus ID: NATL2_15561; TC 1.B.23; Belongs to the OprB family.
  
     0.758
AAZ58329.1
Uncharacterized membrane protein; Alternative locus ID: NATL2_16321.
  
     0.758
AAZ59319.1
Uncharacterized membrane protein; Alternative locus ID: NATL2_05381.
  
     0.753
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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