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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ57717.1Uncharacterized membrane protein; Alternative locus ID: NATL2_08381. (211 aa)    
Predicted Functional Partners:
AAZ57714.1
Asparaginase; Alternative locus ID: NATL2_08351.
       0.821
AAZ57715.1
Conserved hypothetical protein; Alternative locus ID: NATL2_08361.
       0.821
rsfS
Iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.821
secE
Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.774
AAZ59094.1
Uncharacterized membrane protein; Alternative locus ID: NATL2_02981.
  
     0.774
AAZ57516.1
Uncharacterized membrane protein; Alternative locus ID: NATL2_06271.
  
     0.773
AAZ57855.1
Hypothetical protein; Alternative locus ID: NATL2_09921.
  
     0.773
AAZ57903.1
AbrB family transciptional regulator; Alternative locus ID: NATL2_10531.
  
     0.773
AAZ58418.1
Uncharacterized conserved membrane protein; Alternative locus ID: NATL2_17261.
  
     0.773
AAZ58579.1
Beta-lactamase superfamily protein; Alternative locus ID: NATL2_19061.
  
     0.773
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.