STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ57737.1Vng0271c-like protein; Alternative locus ID: NATL2_08591. (395 aa)    
Predicted Functional Partners:
AAZ57738.1
Alpha amylase, catalytic subdomain; Alternative locus ID: NATL2_08601.
   
 0.975
AAZ57739.1
HAD-superfamily hydrolase subfamily IIB:HAD-superfamily hydrolase YedP; Alternative locus ID: NATL2_08611.
 
     0.919
AAZ58688.1
Rod shape-determining protein MreC; Alternative locus ID: NATL2_20201.
  
 
 0.726
AAZ57740.1
Phosphoribulokinase/uridine kinase family enzyme; Alternative locus ID: NATL2_08621.
 
     0.712
AAZ58159.1
Helix-turn-helix motif protein; Alternative locus ID: NATL2_14381.
   
 
 0.653
AAZ59278.1
Putative Uncharacterized protein conserved in bacteria; Alternative locus ID: NATL2_04951.
   
 
 0.653
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
   0.461
pheT
phenylalanyl-tRNA synthetase beta subunit; Alternative locus ID: NATL2_09581; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.443
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
     
 0.403
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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