STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ57739.1HAD-superfamily hydrolase subfamily IIB:HAD-superfamily hydrolase YedP; Alternative locus ID: NATL2_08611. (269 aa)    
Predicted Functional Partners:
AAZ57738.1
Alpha amylase, catalytic subdomain; Alternative locus ID: NATL2_08601.
 
     0.957
AAZ57737.1
Vng0271c-like protein; Alternative locus ID: NATL2_08591.
 
     0.919
AAZ57740.1
Phosphoribulokinase/uridine kinase family enzyme; Alternative locus ID: NATL2_08621.
 
     0.858
AAZ57741.1
Conserved hypothetical protein; Alternative locus ID: NATL2_08631.
       0.499
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.