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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ57757.1DNA polymerase III, alpha subunit; Alternative locus ID: NATL2_08811. (1172 aa)    
Predicted Functional Partners:
AAZ58735.1
DNA polymerase III, delta subunit; Alternative locus ID: NATL2_20701.
   
 0.996
dnaX
DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
 0.996
AAZ58817.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
 0.996
AAZ58983.1
DNA polymerase III, delta prime subunit; Alternative locus ID: NATL2_01811.
    
 0.996
AAZ57551.1
DNA polymerase III, epsilon subunit; Alternative locus ID: NATL2_06621.
  
 0.971
AAZ58690.1
Single-strand binding protein; Alternative locus ID: NATL2_20221.
    
 
 0.760
AAZ59323.1
Single-stranded DNA-binding protein; Alternative locus ID: NATL2_05421.
    
 
 0.760
AAZ57574.1
Conserved hypothetical protein; Alternative locus ID: NATL2_06871.
   
 
 0.688
AAZ57766.1
DNA-directed DNA polymerase; Alternative locus ID: NATL2_08901.
  
  
 0.678
secA
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
  
   
 0.662
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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