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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ57816.1Conserved hypothetical protein; Alternative locus ID: NATL2_09431. (206 aa)    
Predicted Functional Partners:
AAZ57817.1
D-alanyl-D-alanine carboxypeptidase; Alternative locus ID: NATL2_09441.
       0.821
AAZ57815.1
Possible cysteine desulfurase (class-V aminotransferase family); Alternative locus ID: NATL2_09421.
       0.809
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.793
thf1
Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
     0.769
AAZ59283.1
Hypothetical protein; Alternative locus ID: NATL2_05001.
  
     0.767
AAZ58295.1
Uncharacterized membrane protein; Alternative locus ID: NATL2_15921.
  
     0.761
AAZ58804.1
Conserved hypothetical protein; Alternative locus ID: NATL2_21441.
  
     0.761
AAZ59149.1
Rubredoxin; Alternative locus ID: NATL2_03551.
  
     0.760
AAZ58141.1
PsbP; Alternative locus ID: NATL2_14201.
  
     0.752
AAZ57588.1
Conserved hypothetical protein; Alternative locus ID: NATL2_07021.
  
     0.747
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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