Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAZ57950.1Hypothetical protein; Alternative locus ID: NATL2_11241. (81 aa)    
Predicted Functional Partners:
AAZ57951.1
Conserved hypothetical protein; Alternative locus ID: NATL2_11251.
       0.570
ABU23937.1
Conserved hypothetical protein; Alternative locus ID: NATL2_11231.
       0.493
AAZ57948.1
Protein family PM-6; Alternative locus ID: NATL2_11211.
       0.430
AAZ57949.1
Hypothetical protein; Alternative locus ID: NATL2_11221.
       0.430
AAZ57952.1
Conserved hypothetical protein; Alternative locus ID: NATL2_11261.
       0.412
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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