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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ58216.1Hypothetical protein; Alternative locus ID: NATL2_15031. (43 aa)    
Predicted Functional Partners:
AAZ58215.1
Hypothetical protein; Alternative locus ID: NATL2_15021.
 
     0.885
AAZ59113.1
Conserved hypothetical protein; Alternative locus ID: NATL2_03171.
  
     0.695
AAZ58217.1
Conserved hypothetical protein; Alternative locus ID: NATL2_15041.
 
     0.681
rpmH
LSU ribosomal protein L34P; Alternative locus ID: NATL2_15901; Belongs to the bacterial ribosomal protein bL34 family.
  
     0.593
rnpA
Ribonuclease P protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.538
AAZ59298.1
Conserved hypothetical protein; Alternative locus ID: NATL2_05161.
  
     0.534
AAZ57913.1
Conserved hypothetical protein; Alternative locus ID: NATL2_10651.
  
     0.503
AAZ59162.1
PBS lyase HEAT-like repeat; Alternative locus ID: NATL2_03681.
  
     0.450
AAZ59160.1
Phycoerythrin class III alpha chain CpeA; Alternative locus ID: NATL2_03661.
  
     0.415
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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