STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ58288.1Glycosyltransferase; Alternative locus ID: NATL2_15851. (369 aa)    
Predicted Functional Partners:
AAZ58289.1
Putative SMR family transporter, possible pecM-like protein; Alternative locus ID: NATL2_15861.
  
    0.822
AAZ58287.1
Conserved hypothetical protein; Alternative locus ID: NATL2_15841.
       0.821
AAZ58290.1
Signal peptide peptidase A, Serine peptidase, MEROPS family S49; Alternative locus ID: NATL2_15871.
       0.646
AAZ58291.1
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
       0.643
AAZ58672.1
Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP); Alternative locus ID: NATL2_20041; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.535
AAZ59220.1
Glycosyl transferases group 1; Alternative locus ID: NATL2_04331.
  
     0.533
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.471
rpmH
LSU ribosomal protein L34P; Alternative locus ID: NATL2_15901; Belongs to the bacterial ribosomal protein bL34 family.
 
     0.414
AAZ58568.1
Glutamate synthase (ferredoxin); Alternative locus ID: NATL2_18951.
      
 0.410
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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