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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ58290.1Signal peptide peptidase A, Serine peptidase, MEROPS family S49; Alternative locus ID: NATL2_15871. (269 aa)    
Predicted Functional Partners:
AAZ58291.1
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
       0.821
AAZ58289.1
Putative SMR family transporter, possible pecM-like protein; Alternative locus ID: NATL2_15861.
       0.662
AAZ58288.1
Glycosyltransferase; Alternative locus ID: NATL2_15851.
       0.646
AAZ58287.1
Conserved hypothetical protein; Alternative locus ID: NATL2_15841.
       0.643
AAZ58292.1
Conserved hypothetical protein; Alternative locus ID: NATL2_15891.
       0.617
rpmH
LSU ribosomal protein L34P; Alternative locus ID: NATL2_15901; Belongs to the bacterial ribosomal protein bL34 family.
       0.538
ABU24106.1
Hypothetical protein; Alternative locus ID: NATL2_21381.
     
 0.441
AAZ59334.1
Signal peptidase I, Serine peptidase, MEROPS family S26A; Alternative locus ID: NATL2_05531; Belongs to the peptidase S26 family.
      
 0.420
rnpA
Ribonuclease P protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.403
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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