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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ58453.1Conserved hypothetical protein; Alternative locus ID: NATL2_17731. (126 aa)    
Predicted Functional Partners:
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.942
AAZ59103.1
Conserved hypothetical protein; Alternative locus ID: NATL2_03071.
  
     0.766
AAZ58815.1
Conserved hypothetical protein; Alternative locus ID: NATL2_21561.
  
     0.735
AAZ57533.1
Conserved hypothetical protein; Alternative locus ID: NATL2_06441.
  
     0.700
AAZ58980.1
Conserved hypothetical protein in cyanobacteria; Alternative locus ID: NATL2_01781; Belongs to the UPF0367 family.
  
     0.699
AAZ58452.1
Conserved hypothetical protein; Alternative locus ID: NATL2_17721.
 
     0.686
AAZ58434.1
Conserved hypothetical protein; Alternative locus ID: NATL2_17461.
  
     0.673
AAZ58186.1
Alternative locus ID: NATL2_14701.
  
     0.668
AAZ57501.1
Uncharacterized YCII family conserved protein; Alternative locus ID: NATL2_06111.
  
     0.664
AAZ57579.1
Conserved hypothetical protein; Alternative locus ID: NATL2_06921.
 
     0.660
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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