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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pebBPhycoerythrobilin:ferredoxin oxidoreductase PebB; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family. (258 aa)    
Predicted Functional Partners:
pebA
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
 
  
0.985
cpcS
CpeS-like protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.787
AAZ58656.1
Protein tyrosine phosphatase; Alternative locus ID: NATL2_19881; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.775
AAZ59159.1
Phycoerythrin class III beta chain CpeB; Alternative locus ID: NATL2_03651.
  
   
 0.765
AAZ59162.1
PBS lyase HEAT-like repeat; Alternative locus ID: NATL2_03681.
  
   
 0.757
AAZ59160.1
Phycoerythrin class III alpha chain CpeA; Alternative locus ID: NATL2_03661.
  
   
 0.742
AAZ58659.1
Heme oxygenase (decyclizing); Alternative locus ID: NATL2_19911.
     
 0.741
cpcT
CpeT protein-like protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.712
AAZ59166.1
Phycoerythrin class III gamma chain; Alternative locus ID: NATL2_03721; Belongs to the phycobilisome linker protein family.
  
   
 0.650
AAZ57921.1
Plastoquinol oxidase immutans; Alternative locus ID: NATL2_10791.
  
     0.635
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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