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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ58709.1Putative ABC-type polysaccharide/polyol phosphate transport system ATPase component; Alternative locus ID: NATL2_20411. (459 aa)    
Predicted Functional Partners:
AAZ58708.1
Putative ABC-type polysaccharide/polyol phosphate export systems permease component; Alternative locus ID: NATL2_20401.
 
 0.999
secA
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
       0.732
AAZ59207.1
TPR repeat; Alternative locus ID: NATL2_04191.
 
 
 0.685
AAZ58672.1
Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP); Alternative locus ID: NATL2_20041; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.597
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.542
AAZ58583.1
TPR repeat; Alternative locus ID: NATL2_19131.
 
   
 0.536
AAZ58446.1
TPR repeat; Alternative locus ID: NATL2_17631.
 
   
 0.533
AAZ58854.1
TPR repeat; Alternative locus ID: NATL2_00381.
 
   
 0.443
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
      
 0.412
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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