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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ58787.1Possible DNA mismatch repair proteins, mutS fa; Alternative locus ID: NATL2_21241. (270 aa)    
Predicted Functional Partners:
AAZ58786.1
uroporphyrinogen-III C-methyltransferase; Alternative locus ID: NATL2_21231.
  
  
 0.879
ABU24105.1
Conserved hypothetical protein; Alternative locus ID: NATL2_21251.
       0.572
AAZ58325.1
SAM (and some other nucleotide) binding motif protein; Alternative locus ID: NATL2_16281.
     
 0.534
AAZ58571.1
Precorrin-3 methyltransferase; Alternative locus ID: NATL2_18981.
     
 0.525
AAZ58788.1
Assimilatory nitrite reductase (ferredoxin) precursor; Alternative locus ID: NATL2_21261; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.488
AAZ58568.1
Glutamate synthase (ferredoxin); Alternative locus ID: NATL2_18951.
     
 0.403
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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