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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ58850.1Serine-pyruvate/aspartate aminotransferase related enzyme; Alternative locus ID: NATL2_00331. (384 aa)    
Predicted Functional Partners:
cbiD
Cobalamin (vitamin B12) biosynthesis CbiD protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
       0.648
AAZ58417.1
D-3-phosphoglycerate dehydrogenase; Alternative locus ID: NATL2_17251; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.638
AAZ58568.1
Glutamate synthase (ferredoxin); Alternative locus ID: NATL2_18951.
  
  
 0.544
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
       0.526
AAZ59335.1
Phosphoglycerate mutase; Alternative locus ID: NATL2_05541; Belongs to the phosphoglycerate mutase family.
  
 
  0.519
purD
Phosphoribosylamine--glycine ligase; Alternative locus ID: NATL2_17101; Belongs to the GARS family.
  
    0.467
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  
 0.466
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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