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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ58972.1Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. (486 aa)    
Predicted Functional Partners:
AAZ58127.1
Phytoene dehydrogenase / carotenoid isomerase; Alternative locus ID: NATL2_14061.
 
  
 0.973
AAZ58179.1
Lycopene cyclase (CrtL-type); Alternative locus ID: NATL2_14611.
  
  
 0.935
AAZ57565.1
Lycopene cyclase (CrtL-type); Alternative locus ID: NATL2_06771.
  
  
 0.933
AAZ58998.1
Zeta-carotene desaturase / three-step phytoene desaturase; Alternative locus ID: NATL2_01961.
  
  
 
0.919
AAZ58971.1
Oligoketide cyclase/lipid transport protein-like protein; Alternative locus ID: NATL2_01681.
 
     0.849
AAZ58997.1
Phytoene synthase; Alternative locus ID: NATL2_01951.
 
   
 0.794
AAZ59002.1
Conserved NnrU/NnuR ortholog membrane enzyme; Alternative locus ID: NATL2_02001.
  
     0.772
psb27
Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
   
 0.769
AAZ59085.1
Photosystem II manganese-stabilizing protein PsbO; Alternative locus ID: NATL2_02881.
  
     0.768
AAZ57550.1
Conserved hypothetical protein; Alternative locus ID: NATL2_06611.
  
     0.757
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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