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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ59159.1Phycoerythrin class III beta chain CpeB; Alternative locus ID: NATL2_03651. (182 aa)    
Predicted Functional Partners:
AAZ59160.1
Phycoerythrin class III alpha chain CpeA; Alternative locus ID: NATL2_03661.
 
 
 0.999
AAZ59166.1
Phycoerythrin class III gamma chain; Alternative locus ID: NATL2_03721; Belongs to the phycobilisome linker protein family.
 
 
 0.998
cpcS
CpeS-like protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
  
 0.985
cpcT
CpeT protein-like protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
  
 0.981
AAZ59162.1
PBS lyase HEAT-like repeat; Alternative locus ID: NATL2_03681.
  
  
 0.973
AAZ59161.1
Putative bilin biosynthesis protein cpeZ; Alternative locus ID: NATL2_03671.
    
 0.951
AAZ57667.1
Glucose-1-phosphate adenylyltransferase; Alternative locus ID: NATL2_07891; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 
 0.921
AAZ59163.1
Possible bilin biosynthesis protein CpeY; Alternative locus ID: NATL2_03691.
     
 0.914
pebA
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
 
   
 0.785
pebB
Phycoerythrobilin:ferredoxin oxidoreductase PebB; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family.
  
   
 0.765
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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