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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ59216.1Conserved hypothetical protein; Alternative locus ID: NATL2_04291. (88 aa)    
Predicted Functional Partners:
AAZ58483.1
Nitrogen regulatory protein P-II; Alternative locus ID: NATL2_18041; Belongs to the P(II) protein family.
    
 
 0.954
AAZ59100.1
Transcriptional regulator, Crp/Fnr family; Alternative locus ID: NATL2_03041.
  
 
 
 0.885
AAZ59215.1
Possible cobalt transport protein; Alternative locus ID: NATL2_04281.
 
     0.842
AAZ57706.1
HTH of cAMP family transcriptional regulator; Alternative locus ID: NATL2_08271.
  
 
 
 0.833
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
  0.822
AAZ59217.1
Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
   
   0.808
AAZ59067.1
Conserved hypothetical protein; Alternative locus ID: NATL2_02691.
  
 
 
 0.784
AAZ58268.1
Cyanobacterial porin; Alternative locus ID: NATL2_15561; TC 1.B.23; Belongs to the OprB family.
  
 
   0.781
der
Small GTP-binding protein protein domain:GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.781
AAZ57903.1
AbrB family transciptional regulator; Alternative locus ID: NATL2_10531.
  
     0.774
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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