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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ59243.1Putative ABC transporter, oligopeptides; Alternative locus ID: NATL2_04601. (283 aa)    
Predicted Functional Partners:
AAZ59047.1
ATPase; Alternative locus ID: NATL2_02481.
 
 0.999
AAZ58196.1
ABC-type oligopeptide transport system permease; Alternative locus ID: NATL2_14801.
 
 0.998
AAZ58195.1
ABC-type oligopeptide transport system periplasmic component; Alternative locus ID: NATL2_14791.
 
 0.993
ABU23867.1
Hypothetical protein; Alternative locus ID: NATL2_04591.
       0.572
AAZ57646.1
ATPase; Alternative locus ID: NATL2_07681.
 
 
    0.495
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
  
 0.437
AAZ58672.1
Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP); Alternative locus ID: NATL2_20041; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.435
Your Current Organism:
Prochlorococcus marinus NATL2A
NCBI taxonomy Id: 59920
Other names: P. marinus str. NATL2A, Prochlorococcus marinus str. NATL2A, Prochlorococcus sp. NATL2A
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