STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_0033Holliday junction DNA helicase RuvB; Alternative locus ID: PMIT9107_1411. (352 aa)    
Predicted Functional Partners:
EU92_1418
Holliday junction DNA helicase RuvA; Alternative locus ID: PMIT9107_0535.
 
 0.999
EU92_1018
Crossover junction endodeoxyribonuclease RuvC; Alternative locus ID: PMIT9107_1317.
 
 0.984
EU92_0030
Hypothetical protein; Alternative locus ID: PMIT9107_1408; FIG00940334: hypothetical protein.
       0.824
EU92_0031
N-acetyl-L,L-diaminopimelate deacetylase-like; Alternative locus ID: PMIT9107_1409.
       0.824
EU92_0032
TPR repeat precursor; Alternative locus ID: PMIT9107_1410.
       0.824
EU92_1355
Excinuclease ABC subunit C; Alternative locus ID: PMIT9107_0472.
 
 
 0.798
EU92_0066
Excinuclease ABC subunit B; Alternative locus ID: PMIT9107_1444.
    
 0.797
EU92_0130
Excinuclease ABC subunit A; Alternative locus ID: PMIT9107_1508.
  
 
 0.795
EU92_1131
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Alternative locus ID: PMIT9107_1708.
  
  
 0.750
EU92_0175
DNA polymerasee I; Alternative locus ID: PMIT9107_1550.
 
   
 0.664
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.