STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_0271Putative polysaccharide export or synthesis protein; Alternative locus ID: PMIT9107_1646. (367 aa)    
Predicted Functional Partners:
EU92_0270
Hypothetical protein; Alternative locus ID: PMIT9107_1645.
  
 0.999
EU92_0579
Scaffold protein for 4Fe-4S cluster assembly; Alternative locus ID: PMIT9107_1895; MRP-like, similar to chloroplast-targeted plant protein HCF101.
  
 0.882
EU92_0252
Sugar transferase involved in lipopolysaccharide synthesi; Alternative locus ID: PMIT9107_1627.
 
 
 0.874
EU92_1870
Outer membrane efflux protein precursor; Alternative locus ID: PMIT9107_0223.
  
  
 0.773
EU92_0918
Adhesin-like protein; Alternative locus ID: PMIT9107_1217.
     
 0.723
EU92_0269
GDP-L-fucose synthetase; Alternative locus ID: PMIT9107_1644.
 
  
 0.721
EU92_0463
Mannose-1-phosphate guanylyltransferase (GDP); Alternative locus ID: PMIT9107_1181.
  
  
 0.712
EU92_0247
Hypothetical protein; Alternative locus ID: PMIT9107_1622.
 
  
 0.645
EU92_1510
Glycosyl transferase; Alternative locus ID: PMIT9107_0627; family 2.
 
  
 0.620
EU92_0056
Serine acetyltransferase; Alternative locus ID: PMIT9107_1434.
  
 
 0.505
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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