STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_0390Putative high light inducible protein; Alternative locus ID: PMIT9107_1108. (81 aa)    
Predicted Functional Partners:
EU92_0389
Hypothetical protein; Alternative locus ID: PMIT9107_1107; FIG00941332: hypothetical protein.
       0.824
EU92_0391
Adenosylcobinamide-phosphate synthase; Alternative locus ID: PMIT9107_1109.
       0.727
EU92_0392
Ketol-acid reductoisomerase; Alternative locus ID: PMIT9107_1110.
       0.727
EU92_0393
ATP-dependent Clp protease proteolytic subunit; Alternative locus ID: PMIT9107_1111.
       0.542
EU92_0394
ATP-dependent Clp protease proteolytic subunit; Alternative locus ID: PMIT9107_1112.
       0.514
EU92_0388
Hypothetical protein; Alternative locus ID: PMIT9107_1106.
       0.498
EU92_0395
Pili retraction protein pilT; Alternative locus ID: PMIT9107_1113.
       0.415
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.