STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_0414Nickel-dependent superoxide dismutase; Alternative locus ID: PMIT9107_1132. (157 aa)    
Predicted Functional Partners:
EU92_0413
Putative signal peptidase; Alternative locus ID: PMIT9107_1131.
 
   
 0.935
EU92_0415
FKBP-type peptidyl-prolyl cis-trans isomerase; Alternative locus ID: PMIT9107_1133.
       0.644
EU92_0346
Steroid 5-alpha reductase; Alternative locus ID: PMIT9107_1064; C-terminal domain.
  
     0.496
EU92_1259
Alternative locus ID: PMIT9107_0376.
  
     0.472
EU92_1948
Hypothetical protein; Alternative locus ID: PMIT9107_0301; FIG00940093: hypothetical protein.
      
 0.470
EU92_0017
Na+/H+ antiporter; Alternative locus ID: PMIT9107_1395.
      
 0.467
EU92_1750
Sulfate permease; Alternative locus ID: PMIT9107_0103.
      
 0.451
EU92_0416
Apolipoprotein N-acyltransferase; Alternative locus ID: PMIT9107_1134.
       0.446
EU92_0221
Hypothetical protein; Alternative locus ID: PMIT9107_1596; FIG00940928: hypothetical protein.
  
     0.432
EU92_1311
Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic); Alternative locus ID: PMIT9107_0428.
      
 0.400
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.