Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU92_0484ABC transporter; Alternative locus ID: PMIT9107_1202; ATP binding protein. (563 aa)    
Predicted Functional Partners:
EU92_1452
ATPase; Alternative locus ID: PMIT9107_0569.
  
  
  0.895
EU92_1512
Cell division transporter; Alternative locus ID: PMIT9107_0629; ATP-binding protein FtsE; TCDB 3.A.5.1.1.
  
  
  0.872
EU92_1084
ABC-type multidrug transport system; Alternative locus ID: PMIT9107_1661; ATPase component.
  
 
0.816
EU92_1458
ABC transporter; Alternative locus ID: PMIT9107_0575; ATP binding component, possibly iron transporter.
  
  
 
0.748
EU92_1597
Putative ABC transporter; Alternative locus ID: PMIT9107_0714; ATP-binding component.
  
  
 
0.738
EU92_1842
Putative ABC transporter; Alternative locus ID: PMIT9107_0195; ATP-binding component.
  
  
 
0.733
EU92_1498
Lipopolysaccharide ABC transporter; Alternative locus ID: PMIT9107_0615; ATP-binding protein LptB.
  
  
 
0.709
EU92_0052
DNA gyrase subunit B; Alternative locus ID: PMIT9107_1430.
  
 
 0.708
EU92_0185
Thioredoxin reductase; Alternative locus ID: PMIT9107_1560.
  
 
  0.704
EU92_0654
Putative DnaK-type molecular chaperone (HSP70 family); Alternative locus ID: PMIT9107_1966.
  
  0.693
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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