STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_0484ABC transporter; Alternative locus ID: PMIT9107_1202; ATP binding protein. (563 aa)    
Predicted Functional Partners:
EU92_0382
Putative transporter; Alternative locus ID: PMIT9107_1100; membrane component.
    
  0.851
EU92_1084
ABC-type multidrug transport system; Alternative locus ID: PMIT9107_1661; ATPase component.
 
0.835
EU92_1452
ATPase; Alternative locus ID: PMIT9107_0569.
  
  
  0.797
EU92_1512
Cell division transporter; Alternative locus ID: PMIT9107_0629; ATP-binding protein FtsE; TCDB 3.A.5.1.1.
  
  
  0.794
EU92_0185
Thioredoxin reductase; Alternative locus ID: PMIT9107_1560.
 
 
 0.742
EU92_0654
Putative DnaK-type molecular chaperone (HSP70 family); Alternative locus ID: PMIT9107_1966.
  
  0.740
EU92_1370
Chaperone protein DnaK; Alternative locus ID: PMIT9107_0487.
  
  0.740
EU92_0122
Chaperone protein DnaK; Alternative locus ID: PMIT9107_1500.
  
  0.738
EU92_0052
DNA gyrase subunit B; Alternative locus ID: PMIT9107_1430.
  
 
 0.735
EU92_0236
ATPase of the AAA+ family; Alternative locus ID: PMIT9107_1611.
  
 
 0.718
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.