STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_0644Xaa-Pro aminopeptidase; Alternative locus ID: PMIT9107_1956. (441 aa)    
Predicted Functional Partners:
EU92_0640
NAD synthetase; Alternative locus ID: PMIT9107_1952; Glutamine amidotransferase chain of NAD synthetase.
  
 
  0.760
EU92_0645
Hypothetical protein; Alternative locus ID: PMIT9107_1957; FIG00941090: hypothetical protein.
       0.708
EU92_0643
Membrane associated SBC domain; Alternative locus ID: PMIT9107_1955.
  
    0.673
EU92_0641
Nicotinate-nucleotide adenylyltransferase bacterial NadD family; Alternative locus ID: PMIT9107_1953.
       0.672
EU92_0642
Small GTP-binding protein domain; Alternative locus ID: PMIT9107_1954.
       0.672
EU92_1132
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Alternative locus ID: PMIT9107_1709.
 
 
 
 0.671
EU92_0621
Adenylosuccinate lyase; Alternative locus ID: PMIT9107_1933.
    
  0.617
EU92_0105
Aminomethyltransferase (glycine cleavage system T protein); Alternative locus ID: PMIT9107_1483.
  
 0.590
EU92_0646
Putative 30S ribosomal protein PSRP-3; Alternative locus ID: PMIT9107_1958.
       0.571
EU92_0123
Shikimate 5-dehydrogenase I alpha; Alternative locus ID: PMIT9107_1501.
    
  0.474
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.