STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU92_0751Tryptophanyl-tRNA synthetase; Alternative locus ID: PMIT9107_0854. (338 aa)    
Predicted Functional Partners:
EU92_0752
Threonyl-tRNA synthetase; Alternative locus ID: PMIT9107_0855.
     
 0.868
EU92_0750
Hypothetical protein; Alternative locus ID: PMIT9107_0853; FIG00940233: hypothetical protein.
       0.824
EU92_0753
Glucokinase; Alternative locus ID: PMIT9107_0856.
       0.804
EU92_0754
Homoserine kinase; Alternative locus ID: PMIT9107_0857.
  
  
 0.799
EU92_1344
Phenylalanyl-tRNA synthetase beta chain; Alternative locus ID: PMIT9107_0461.
  
  
 0.703
EU92_0749
Hypothetical protein; Alternative locus ID: PMIT9107_0852.
       0.644
EU92_0119
Chloride channel protein; Alternative locus ID: PMIT9107_1497.
     
 0.625
EU92_0237
Seryl-tRNA synthetase; Alternative locus ID: PMIT9107_1612.
  
 
 0.617
EU92_0748
Manganese ABC transporter; Alternative locus ID: PMIT9107_0851; periplasmic-binding protein SitA.
       0.615
EU92_0747
ABC transporter; Alternative locus ID: PMIT9107_0850; ATP binding domain, possibly Mn transporter.
       0.611
Your Current Organism:
Prochlorococcus marinus MIT9107
NCBI taxonomy Id: 59921
Other names: P. marinus str. MIT 9107, Prochlorococcus marinus str. MIT 9107, Prochlorococcus sp. MIT 9107, Prochlorococcus sp. MIT9107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.